Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn3O88705 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn3O88705 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.97□□□□□ -0.01
Hcn3O88705 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
Hcn3O88705 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.97□□□□□ -0.01
Hcn3O88705 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hcn3O88705 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hcn3O88705 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hcn3O88705 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Hcn3O88705 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hcn3O88705 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn3O88705 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.96□□□□□ -0.01
Hcn3O88705 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.96□□□□□ -0.01
Hcn3O88705 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.96□□□□□ -0.01
Hcn3O88705 Efs-202ENSMUST00000227037 2540 ntBASIC14.96□□□□□ -0.01
Hcn3O88705 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Hcn3O88705 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.96□□□□□ -0.01
Hcn3O88705 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hcn3O88705 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.96□□□□□ -0.01
Hcn3O88705 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.96□□□□□ -0.01
Hcn3O88705 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn3O88705 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Hcn3O88705 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hcn3O88705 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hcn3O88705 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Hcn3O88705 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hcn3O88705 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hcn3O88705 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.95□□□□□ -0.02
Hcn3O88705 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.95□□□□□ -0.02
Hcn3O88705 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Hcn3O88705 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.95□□□□□ -0.02
Hcn3O88705 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.95□□□□□ -0.02
Hcn3O88705 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.95□□□□□ -0.02
Hcn3O88705 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hcn3O88705 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hcn3O88705 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hcn3O88705 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hcn3O88705 Gm18421-201ENSMUST00000204122 625 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms