Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Cops6O88545 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Cops6O88545 Gm13365-201ENSMUST00000121188 973 ntBASIC18.98■□□□□ 0.63
Cops6O88545 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.98■□□□□ 0.63
Cops6O88545 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.98■□□□□ 0.63
Cops6O88545 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cops6O88545 Gm20553-201ENSMUST00000204205 844 ntBASIC18.98■□□□□ 0.63
Cops6O88545 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.98■□□□□ 0.63
Cops6O88545 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.98■□□□□ 0.63
Cops6O88545 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cops6O88545 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cops6O88545 Gm12008-201ENSMUST00000117791 755 ntBASIC18.97■□□□□ 0.63
Cops6O88545 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.97■□□□□ 0.63
Cops6O88545 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.97■□□□□ 0.63
Cops6O88545 Gm10499-201ENSMUST00000174094 934 ntBASIC18.97■□□□□ 0.63
Cops6O88545 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.97■□□□□ 0.63
Cops6O88545 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.97■□□□□ 0.63
Cops6O88545 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cops6O88545 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.96■□□□□ 0.63
Cops6O88545 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.96■□□□□ 0.63
Cops6O88545 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cops6O88545 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Gm9385-201ENSMUST00000117563 472 ntBASIC18.96■□□□□ 0.63
Cops6O88545 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.96■□□□□ 0.63
Cops6O88545 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.96■□□□□ 0.63
Cops6O88545 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Cops6O88545 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Cops6O88545 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cops6O88545 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
Cops6O88545 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops6O88545 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cops6O88545 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.95■□□□□ 0.62
Cops6O88545 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cops6O88545 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cops6O88545 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cops6O88545 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cops6O88545 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.95■□□□□ 0.62
Cops6O88545 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.95■□□□□ 0.62
Cops6O88545 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.95■□□□□ 0.62
Cops6O88545 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cops6O88545 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cops6O88545 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops6O88545 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops6O88545 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops6O88545 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cops6O88545 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.95■□□□□ 0.62
Cops6O88545 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cops6O88545 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cops6O88545 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.94■□□□□ 0.62
Cops6O88545 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Cops6O88545 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Gm15920-201ENSMUST00000118998 402 ntBASIC18.94■□□□□ 0.62
Cops6O88545 Auts2-212ENSMUST00000178555 309 ntBASIC18.94■□□□□ 0.62
Cops6O88545 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.94■□□□□ 0.62
Cops6O88545 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cops6O88545 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms