Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC20.12■□□□□ 0.81
Nid2O88322 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Nid2O88322 Gm7730-201ENSMUST00000212486 454 ntBASIC20.12■□□□□ 0.81
Nid2O88322 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC20.12■□□□□ 0.81
Nid2O88322 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nid2O88322 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nid2O88322 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Nid2O88322 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Gm14719-201ENSMUST00000121891 340 ntBASIC20.11■□□□□ 0.81
Nid2O88322 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Gm27680-201ENSMUST00000184192 160 ntBASIC20.11■□□□□ 0.81
Nid2O88322 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Nid2O88322 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nid2O88322 Gm7488-201ENSMUST00000117148 684 ntBASIC20.1■□□□□ 0.81
Nid2O88322 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC20.1■□□□□ 0.81
Nid2O88322 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC20.1■□□□□ 0.81
Nid2O88322 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.1■□□□□ 0.81
Nid2O88322 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Nid2O88322 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.1■□□□□ 0.81
Nid2O88322 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.1■□□□□ 0.81
Nid2O88322 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nid2O88322 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Gm15487-201ENSMUST00000122373 465 ntBASIC20.1■□□□□ 0.81
Nid2O88322 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nid2O88322 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.1■□□□□ 0.81
Nid2O88322 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nid2O88322 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.09■□□□□ 0.81
Nid2O88322 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nid2O88322 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Gm14767-201ENSMUST00000121559 586 ntBASIC20.09■□□□□ 0.81
Nid2O88322 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nid2O88322 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC20.09■□□□□ 0.81
Nid2O88322 Gm18049-201ENSMUST00000208909 581 ntBASIC20.09■□□□□ 0.81
Nid2O88322 Gm7653-201ENSMUST00000214567 508 ntBASIC20.09■□□□□ 0.81
Nid2O88322 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC20.09■□□□□ 0.81
Nid2O88322 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nid2O88322 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC20.09■□□□□ 0.81
Nid2O88322 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nid2O88322 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nid2O88322 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nid2O88322 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nid2O88322 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nid2O88322 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Nid2O88322 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Nid2O88322 Gm45293-201ENSMUST00000209754 1812 ntBASIC20.08■□□□□ 0.8
Nid2O88322 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.08■□□□□ 0.8
Nid2O88322 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nid2O88322 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nid2O88322 Gm9063-201ENSMUST00000223299 582 ntBASIC20.08■□□□□ 0.8
Nid2O88322 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms