Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.55■□□□□ 0.4
Stx1aO35526 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stx1aO35526 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Stx1aO35526 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.54■□□□□ 0.4
Stx1aO35526 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Stx1aO35526 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.54■□□□□ 0.4
Stx1aO35526 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Stx1aO35526 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Stx1aO35526 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stx1aO35526 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Stx1aO35526 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
Stx1aO35526 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Stx1aO35526 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.53■□□□□ 0.4
Stx1aO35526 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.53■□□□□ 0.4
Stx1aO35526 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Stx1aO35526 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Stx1aO35526 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stx1aO35526 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Stx1aO35526 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Stx1aO35526 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.52■□□□□ 0.4
Stx1aO35526 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.52■□□□□ 0.4
Stx1aO35526 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.52■□□□□ 0.4
Stx1aO35526 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Stx1aO35526 Gm9987-201ENSMUST00000069768 567 ntBASIC17.52■□□□□ 0.4
Stx1aO35526 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stx1aO35526 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stx1aO35526 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Stx1aO35526 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stx1aO35526 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stx1aO35526 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stx1aO35526 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stx1aO35526 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Stx1aO35526 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.51■□□□□ 0.39
Stx1aO35526 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Stx1aO35526 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Stx1aO35526 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.51■□□□□ 0.39
Stx1aO35526 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Stx1aO35526 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Stx1aO35526 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.51■□□□□ 0.39
Stx1aO35526 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms