Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.86■□□□□ 0.77
Col15a1O35206 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.86■□□□□ 0.77
Col15a1O35206 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Col15a1O35206 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Col15a1O35206 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Col15a1O35206 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col15a1O35206 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.85■□□□□ 0.77
Col15a1O35206 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.85■□□□□ 0.77
Col15a1O35206 Gm12151-201ENSMUST00000121374 290 ntBASIC19.85■□□□□ 0.77
Col15a1O35206 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.85■□□□□ 0.77
Col15a1O35206 Gm27306-201ENSMUST00000183970 107 ntBASIC19.85■□□□□ 0.77
Col15a1O35206 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Col15a1O35206 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Col15a1O35206 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Col15a1O35206 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col15a1O35206 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.84■□□□□ 0.77
Col15a1O35206 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.84■□□□□ 0.77
Col15a1O35206 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.84■□□□□ 0.77
Col15a1O35206 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.84■□□□□ 0.77
Col15a1O35206 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.84■□□□□ 0.77
Col15a1O35206 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Col15a1O35206 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Col15a1O35206 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.84■□□□□ 0.77
Col15a1O35206 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.84■□□□□ 0.77
Col15a1O35206 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col15a1O35206 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Col15a1O35206 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Col15a1O35206 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.83■□□□□ 0.77
Col15a1O35206 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Col15a1O35206 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.83■□□□□ 0.77
Col15a1O35206 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.83■□□□□ 0.77
Col15a1O35206 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col15a1O35206 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col15a1O35206 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col15a1O35206 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col15a1O35206 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.83■□□□□ 0.76
Col15a1O35206 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.83■□□□□ 0.76
Col15a1O35206 Gm6415-201ENSMUST00000118488 348 ntBASIC19.83■□□□□ 0.76
Col15a1O35206 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Col15a1O35206 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col15a1O35206 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col15a1O35206 Gm29541-201ENSMUST00000191351 678 ntBASIC19.83■□□□□ 0.76
Col15a1O35206 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col15a1O35206 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col15a1O35206 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Col15a1O35206 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Col15a1O35206 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.82■□□□□ 0.76
Col15a1O35206 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.82■□□□□ 0.76
Col15a1O35206 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.82■□□□□ 0.76
Col15a1O35206 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.82■□□□□ 0.76
Col15a1O35206 Gm15483-201ENSMUST00000120338 456 ntBASIC19.82■□□□□ 0.76
Col15a1O35206 Gm27437-201ENSMUST00000183429 107 ntBASIC19.82■□□□□ 0.76
Col15a1O35206 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.82■□□□□ 0.76
Col15a1O35206 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.82■□□□□ 0.76
Col15a1O35206 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col15a1O35206 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms