Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCL21O00585 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL21O00585 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL21O00585 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCL21O00585 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL21O00585 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.25■□□□□ 0.19
CCL21O00585 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.25■□□□□ 0.19
CCL21O00585 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 AC073648.2-201ENST00000510116 352 ntBASIC16.25■□□□□ 0.19
CCL21O00585 POLD2P1-201ENST00000511220 997 ntBASIC16.25■□□□□ 0.19
CCL21O00585 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.25■□□□□ 0.19
CCL21O00585 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 AC106730.1-201ENST00000566722 1090 ntBASIC16.25■□□□□ 0.19
CCL21O00585 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.25■□□□□ 0.19
CCL21O00585 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 TERC-201ENST00000602385 541 ntBASIC16.25■□□□□ 0.19
CCL21O00585 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CCL21O00585 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.25■□□□□ 0.19
CCL21O00585 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 LINC01521-201ENST00000504184 1943 ntBASIC16.25■□□□□ 0.19
CCL21O00585 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL21O00585 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL21O00585 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL21O00585 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL21O00585 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCL21O00585 AL357033.4-201ENST00000617703 1807 ntBASIC16.24■□□□□ 0.19
CCL21O00585 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 MIR1233-2-201ENST00000408138 82 ntBASIC16.24■□□□□ 0.19
CCL21O00585 MIR1233-1-201ENST00000408722 82 ntBASIC16.24■□□□□ 0.19
CCL21O00585 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CCL21O00585 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCL21O00585 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.24■□□□□ 0.19
CCL21O00585 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL21O00585 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL21O00585 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CCL21O00585 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCL21O00585 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 AC141586.3-201ENST00000562166 1838 ntBASIC16.24■□□□□ 0.19
CCL21O00585 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL21O00585 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL21O00585 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 PMS2P7-201ENST00000506558 1336 ntBASIC16.23■□□□□ 0.19
CCL21O00585 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCL21O00585 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
CCL21O00585 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.23■□□□□ 0.19
CCL21O00585 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.23■□□□□ 0.19
CCL21O00585 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL21O00585 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 RPL13AP23-201ENST00000480739 586 ntBASIC16.23■□□□□ 0.19
CCL21O00585 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.23■□□□□ 0.19
CCL21O00585 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.23■□□□□ 0.19
CCL21O00585 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.23■□□□□ 0.19
CCL21O00585 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.23■□□□□ 0.19
CCL21O00585 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 AL163051.1-201ENST00000569214 1512 ntBASIC16.23■□□□□ 0.19
CCL21O00585 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL21O00585 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms