Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34bJ3QNR8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34bJ3QNR8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34bJ3QNR8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim34bJ3QNR8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Gm14722-201ENSMUST00000118943 689 ntBASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Gm8318-201ENSMUST00000182954 872 ntBASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Chchd1-203ENSMUST00000224633 557 ntBASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim34bJ3QNR8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim34bJ3QNR8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34bJ3QNR8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34bJ3QNR8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34bJ3QNR8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Trim34bJ3QNR8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim34bJ3QNR8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Gm5177-201ENSMUST00000183092 997 ntBASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim34bJ3QNR8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19■□□□□ 0.63
Trim34bJ3QNR8 AC160980.1-201ENSMUST00000224136 970 ntBASIC19■□□□□ 0.63
Trim34bJ3QNR8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Gm5184-201ENSMUST00000220417 1702 ntBASIC19■□□□□ 0.63
Trim34bJ3QNR8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim34bJ3QNR8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Gm27301-201ENSMUST00000184012 127 ntBASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim34bJ3QNR8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Gm45747-201ENSMUST00000212203 999 ntBASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim34bJ3QNR8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms