Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.07□□□□□ -0.16
Pcdh1F7BJK1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh1F7BJK1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh1F7BJK1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.04□□□□□ -0.16
Pcdh1F7BJK1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms