Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Gm18489-201ENSMUST00000172565 551 ntBASIC13.95□□□□□ -0.18
Shank1D3YZU1 Mir6977-201ENSMUST00000184960 64 ntBASIC13.95□□□□□ -0.18
Shank1D3YZU1 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.95□□□□□ -0.18
Shank1D3YZU1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shank1D3YZU1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.94□□□□□ -0.18
Shank1D3YZU1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shank1D3YZU1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Gm5866-201ENSMUST00000177881 973 ntBASIC13.93□□□□□ -0.18
Shank1D3YZU1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.93□□□□□ -0.18
Shank1D3YZU1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Shank1D3YZU1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.92□□□□□ -0.18
Shank1D3YZU1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Rpph1-201ENSMUST00000175096 319 ntBASIC13.92□□□□□ -0.18
Shank1D3YZU1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
Shank1D3YZU1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms