Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Mir6956-201ENSMUST00000183598 62 ntBASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm13365-201ENSMUST00000121188 973 ntBASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm44335-201ENSMUST00000196879 141 ntBASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm44297-201ENSMUST00000198304 141 ntBASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm44346-201ENSMUST00000198851 141 ntBASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Gm3854A0A1B0GSS6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Thap2-203ENSMUST00000218989 527 ntBASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gm3854A0A1B0GSS6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm13616-201ENSMUST00000120600 222 ntBASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gm3854A0A1B0GSS6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gm3854A0A1B0GSS6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms