Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm18666-201ENSMUST00000190039 958 ntBASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.19□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm10602-201ENSMUST00000098239 609 ntBASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-3A0A0B4J1H2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms