Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav4-4-dv10A0A075B651 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav4-4-dv10A0A075B651 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm11355-201ENSMUST00000121120 306 ntBASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm21559-201ENSMUST00000220638 855 ntBASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm8587-201ENSMUST00000076538 843 ntBASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav4-4-dv10A0A075B651 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm9987-201ENSMUST00000069768 567 ntBASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4-4-dv10A0A075B651 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gm7367-201ENSMUST00000057611 492 ntBASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4-4-dv10A0A075B651 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms