Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav8-1A0A075B641 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav8-1A0A075B641 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav8-1A0A075B641 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav8-1A0A075B641 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms