Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClcnkaQ9WUB7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Gm15165-201ENSMUST00000118140 502 ntBASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClcnkaQ9WUB7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Gm12895-201ENSMUST00000122214 226 ntBASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Gm25406-201ENSMUST00000157599 105 ntBASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClcnkaQ9WUB7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Gm15372-201ENSMUST00000120729 834 ntBASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Gm27867-201ENSMUST00000184778 125 ntBASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClcnkaQ9WUB7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms