Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm24589-201ENSMUST00000116692 94 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm17971-201ENSMUST00000190239 806 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm34391-201ENSMUST00000203706 907 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 App-207ENSMUST00000227737 2827 ntBASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Atp6ap1Q9R1Q9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm8097-201ENSMUST00000117903 829 ntBASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atp6ap1Q9R1Q9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm27459-201ENSMUST00000184860 107 ntBASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Atp6ap1Q9R1Q9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atp6ap1Q9R1Q9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms