Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.84■□□□□ 0.13
Tubd1Q9R1K7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubd1Q9R1K7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.83■□□□□ 0.12
Tubd1Q9R1K7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tubd1Q9R1K7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Gm9682-201ENSMUST00000197505 556 ntBASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 AV026068-213ENSMUST00000223675 1171 ntBASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubd1Q9R1K7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tubd1Q9R1K7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms