Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trex2Q9R1A9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trex2Q9R1A9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Gm36967-201ENSMUST00000193814 266 ntBASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Gm7367-201ENSMUST00000057611 492 ntBASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex2Q9R1A9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex2Q9R1A9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Gm27704-201ENSMUST00000185094 107 ntBASIC13.17□□□□□ -0.3
Trex2Q9R1A9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex2Q9R1A9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms