Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nubp1Q9R060 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Gm27494-201ENSMUST00000184735 189 ntBASIC13.71□□□□□ -0.21
Nubp1Q9R060 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.71□□□□□ -0.21
Nubp1Q9R060 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Gm26226-201ENSMUST00000082509 116 ntBASIC13.71□□□□□ -0.21
Nubp1Q9R060 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nubp1Q9R060 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nubp1Q9R060 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.7□□□□□ -0.22
Nubp1Q9R060 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.7□□□□□ -0.22
Nubp1Q9R060 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.7□□□□□ -0.22
Nubp1Q9R060 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nubp1Q9R060 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Gm13616-201ENSMUST00000120600 222 ntBASIC13.69□□□□□ -0.22
Nubp1Q9R060 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Mir7023-201ENSMUST00000185093 64 ntBASIC13.69□□□□□ -0.22
Nubp1Q9R060 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nubp1Q9R060 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.69□□□□□ -0.22
Nubp1Q9R060 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nubp1Q9R060 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms