Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 SAPCD2P3-201ENST00000455031 850 ntBASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 AL390719.2-201ENST00000606993 987 ntBASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 SLC25A1P1-201ENST00000528351 927 ntBASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 Z69720.1-201ENST00000601483 472 ntBASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 IGHV3-41-201ENST00000613121 348 ntBASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 REXO1L6P-202ENST00000619970 1078 ntBASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 TP73-AS1-207ENST00000624167 988 ntBASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.68■□□□□ 0.9
PDLIM7Q9NR12 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 IGHV3-47-201ENST00000425060 335 ntBASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 AP001005.1-201ENST00000571755 1248 ntBASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 KRT8P7-201ENST00000533003 1432 ntBASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDLIM7Q9NR12 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 AF238378.1-201ENST00000526806 358 ntBASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.66■□□□□ 0.9
PDLIM7Q9NR12 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms