Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Hmgn5Q9JL35 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hmgn5Q9JL35 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Hmgn5Q9JL35 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Gm7370-201ENSMUST00000219471 767 ntBASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn5Q9JL35 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn5Q9JL35 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms