Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Vps35Q9EQH3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Vps35Q9EQH3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Vps35Q9EQH3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Vps35Q9EQH3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 App-207ENSMUST00000227737 2827 ntBASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Vps35Q9EQH3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Gm4459-201ENSMUST00000118750 468 ntBASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Gm6257-201ENSMUST00000163864 910 ntBASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Gm7506-201ENSMUST00000207758 815 ntBASIC15.63■□□□□ 0.09
Vps35Q9EQH3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vps35Q9EQH3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vps35Q9EQH3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms