Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Gm7506-201ENSMUST00000207758 815 ntBASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne8Q9DC53 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Gm25745-201ENSMUST00000174945 133 ntBASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne8Q9DC53 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm8825-201ENSMUST00000182565 998 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm4518-201ENSMUST00000182638 718 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne8Q9DC53 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne8Q9DC53 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne8Q9DC53 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne8Q9DC53 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.28■□□□□ 0.2
Cpne8Q9DC53 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne8Q9DC53 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne8Q9DC53 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne8Q9DC53 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms