Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmg20aQ9DC33 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Hmg20aQ9DC33 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmg20aQ9DC33 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Gm12382-201ENSMUST00000122005 922 ntBASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmg20aQ9DC33 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Gm37292-201ENSMUST00000192062 758 ntBASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Gm4974-201ENSMUST00000209974 875 ntBASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmg20aQ9DC33 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Gm10517-202ENSMUST00000192970 758 ntBASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Gm20049-201ENSMUST00000219950 730 ntBASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmg20aQ9DC33 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms