Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 App-207ENSMUST00000227737 2827 ntBASIC20.52■□□□□ 0.88
U2af1Q9D883 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
U2af1Q9D883 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
U2af1Q9D883 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
U2af1Q9D883 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
U2af1Q9D883 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
U2af1Q9D883 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Gm11764-201ENSMUST00000120221 623 ntBASIC20.51■□□□□ 0.87
U2af1Q9D883 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.51■□□□□ 0.87
U2af1Q9D883 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
U2af1Q9D883 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Gm45167-201ENSMUST00000208007 322 ntBASIC20.5■□□□□ 0.87
U2af1Q9D883 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.5■□□□□ 0.87
U2af1Q9D883 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
U2af1Q9D883 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.5■□□□□ 0.87
U2af1Q9D883 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
U2af1Q9D883 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
U2af1Q9D883 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
U2af1Q9D883 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.49■□□□□ 0.87
U2af1Q9D883 Psmb5-202ENSMUST00000227257 622 ntBASIC20.49■□□□□ 0.87
U2af1Q9D883 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
U2af1Q9D883 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
U2af1Q9D883 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
U2af1Q9D883 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
U2af1Q9D883 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms