Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Upk1aQ9D132 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk1aQ9D132 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk1aQ9D132 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Upk1aQ9D132 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Upk1aQ9D132 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk1aQ9D132 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk1aQ9D132 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Upk1aQ9D132 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.83□□□□□ -0.04
Upk1aQ9D132 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Gm44430-201ENSMUST00000203376 995 ntBASIC14.83□□□□□ -0.04
Upk1aQ9D132 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.83□□□□□ -0.04
Upk1aQ9D132 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk1aQ9D132 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Gm15565-201ENSMUST00000118890 427 ntBASIC14.82□□□□□ -0.04
Upk1aQ9D132 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.82□□□□□ -0.04
Upk1aQ9D132 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.82□□□□□ -0.04
Upk1aQ9D132 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk1aQ9D132 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.81□□□□□ -0.04
Upk1aQ9D132 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Gm37722-201ENSMUST00000193757 208 ntBASIC14.81□□□□□ -0.04
Upk1aQ9D132 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.81□□□□□ -0.04
Upk1aQ9D132 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.81□□□□□ -0.04
Upk1aQ9D132 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk1aQ9D132 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Gm12134-201ENSMUST00000122109 520 ntBASIC14.8□□□□□ -0.04
Upk1aQ9D132 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk1aQ9D132 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms