Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lysmd1Q9D0E3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Mir5132-201ENSMUST00000175166 71 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Gm28760-201ENSMUST00000185995 736 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Gm10766-202ENSMUST00000194123 606 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lysmd1Q9D0E3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lysmd1Q9D0E3 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.58■□□□□ 0.25
Lysmd1Q9D0E3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lysmd1Q9D0E3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Lysmd1Q9D0E3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lysmd1Q9D0E3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lysmd1Q9D0E3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lysmd1Q9D0E3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Gm16026-204ENSMUST00000162652 683 ntBASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Gm45784-201ENSMUST00000188360 142 ntBASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Dupd1-202ENSMUST00000224735 548 ntBASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.57■□□□□ 0.24
Lysmd1Q9D0E3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd1Q9D0E3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lysmd1Q9D0E3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Lysmd1Q9D0E3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.56■□□□□ 0.24
Lysmd1Q9D0E3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.56■□□□□ 0.24
Lysmd1Q9D0E3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms