Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afb1Q9CQ70 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afb1Q9CQ70 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afb1Q9CQ70 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb1Q9CQ70 Sybu-209ENSMUST00000228639 4113 ntBASIC12.78□□□□□ -0.36
H2afb1Q9CQ70 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb1Q9CQ70 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afb1Q9CQ70 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.78□□□□□ -0.36
H2afb1Q9CQ70 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms