Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdha3Q91Y16 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdha3Q91Y16 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdha3Q91Y16 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Gm4459-201ENSMUST00000118750 468 ntBASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Gm7506-201ENSMUST00000207758 815 ntBASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Gm8655-201ENSMUST00000221159 852 ntBASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdha3Q91Y16 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Gm6257-201ENSMUST00000163864 910 ntBASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Gm5864-201ENSMUST00000202263 970 ntBASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha3Q91Y16 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms