Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb3Q91XZ7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Gm23634-201ENSMUST00000175071 91 ntBASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Gm18101-201ENSMUST00000215769 548 ntBASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb3Q91XZ7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Gm37744-201ENSMUST00000194616 1590 ntBASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb3Q91XZ7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Gm27000-201ENSMUST00000182943 842 ntBASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb3Q91XZ7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Gm22697-201ENSMUST00000175194 63 ntBASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb3Q91XZ7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms