Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.29■□□□□ 0.04
Pcdhb8Q91XZ2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb8Q91XZ2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb8Q91XZ2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb8Q91XZ2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb8Q91XZ2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb8Q91XZ2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb8Q91XZ2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms