Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trex1Q91XB0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.85■□□□□ 0.45
Trex1Q91XB0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.85■□□□□ 0.45
Trex1Q91XB0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.85■□□□□ 0.45
Trex1Q91XB0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.85■□□□□ 0.45
Trex1Q91XB0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.85■□□□□ 0.45
Trex1Q91XB0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.85■□□□□ 0.45
Trex1Q91XB0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trex1Q91XB0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.84■□□□□ 0.45
Trex1Q91XB0 Gm45612-201ENSMUST00000211320 160 ntBASIC17.84■□□□□ 0.45
Trex1Q91XB0 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.84■□□□□ 0.45
Trex1Q91XB0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.84■□□□□ 0.45
Trex1Q91XB0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trex1Q91XB0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trex1Q91XB0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trex1Q91XB0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trex1Q91XB0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trex1Q91XB0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trex1Q91XB0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trex1Q91XB0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Auts2-212ENSMUST00000178555 309 ntBASIC17.83■□□□□ 0.44
Trex1Q91XB0 Gm10576-201ENSMUST00000191927 825 ntBASIC17.83■□□□□ 0.44
Trex1Q91XB0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.83■□□□□ 0.44
Trex1Q91XB0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.83■□□□□ 0.44
Trex1Q91XB0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trex1Q91XB0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Gm13365-201ENSMUST00000121188 973 ntBASIC17.82■□□□□ 0.44
Trex1Q91XB0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.82■□□□□ 0.44
Trex1Q91XB0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trex1Q91XB0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trex1Q91XB0 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms