Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ebf4Q8K4J2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.29□□□□□ -0.12
Ebf4Q8K4J2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Gm18666-201ENSMUST00000190039 958 ntBASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf4Q8K4J2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf4Q8K4J2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ebf4Q8K4J2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms