Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm11Q8BUV6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lsm11Q8BUV6 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm11Q8BUV6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm11Q8BUV6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Lsm11Q8BUV6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm11Q8BUV6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm11Q8BUV6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm11Q8BUV6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm11Q8BUV6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Gm12106-201ENSMUST00000116006 1200 ntBASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Gm13436-201ENSMUST00000120418 567 ntBASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lsm11Q8BUV6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Mir1668-201ENSMUST00000184114 107 ntBASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Gm37319-201ENSMUST00000193500 636 ntBASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Gm30025-201ENSMUST00000218555 728 ntBASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm11Q8BUV6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.31□□□□□ -0.28
Lsm11Q8BUV6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms