Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Gm5779-201ENSMUST00000218467 910 ntBASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ddx55Q6ZPL9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Gm10499-201ENSMUST00000174094 934 ntBASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx55Q6ZPL9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Gm14722-201ENSMUST00000118943 689 ntBASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.72■□□□□ 0.43
Ddx55Q6ZPL9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Mir6977-201ENSMUST00000184960 64 ntBASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx55Q6ZPL9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ddx55Q6ZPL9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Ddx55Q6ZPL9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms