Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf220Q6PDX6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Il3ra-202ENSMUST00000223589 738 ntBASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf220Q6PDX6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Gm27000-201ENSMUST00000182943 842 ntBASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Gm38027-201ENSMUST00000192315 235 ntBASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf220Q6PDX6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.84□□□□□ -0.03
Rnf220Q6PDX6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms