Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Six4Q61321 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.76■□□□□ 0.11
Six4Q61321 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Six4Q61321 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.75■□□□□ 0.11
Six4Q61321 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.75■□□□□ 0.11
Six4Q61321 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Six4Q61321 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Six4Q61321 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.74■□□□□ 0.11
Six4Q61321 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.74■□□□□ 0.11
Six4Q61321 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.74■□□□□ 0.11
Six4Q61321 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Gm15173-201ENSMUST00000122049 433 ntBASIC15.74■□□□□ 0.11
Six4Q61321 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Gm7230-201ENSMUST00000173026 815 ntBASIC15.74■□□□□ 0.11
Six4Q61321 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.74■□□□□ 0.11
Six4Q61321 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.74■□□□□ 0.11
Six4Q61321 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.74■□□□□ 0.11
Six4Q61321 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Six4Q61321 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Six4Q61321 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Six4Q61321 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Six4Q61321 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.73■□□□□ 0.11
Six4Q61321 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Six4Q61321 Gm5682-201ENSMUST00000173402 505 ntBASIC15.73■□□□□ 0.11
Six4Q61321 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Gm10060-201ENSMUST00000212002 111 ntBASIC15.73■□□□□ 0.11
Six4Q61321 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Six4Q61321 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Six4Q61321 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Six4Q61321 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Six4Q61321 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.73■□□□□ 0.11
Six4Q61321 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Six4Q61321 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Six4Q61321 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Six4Q61321 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Six4Q61321 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Six4Q61321 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Six4Q61321 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Six4Q61321 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms