Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Gm15590-201ENSMUST00000078419 552 ntBASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav2Q5R1I9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Gm19164-201ENSMUST00000210667 640 ntBASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav2Q5R1I9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Gm27646-201ENSMUST00000183989 110 ntBASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav2Q5R1I9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms