Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Gm25016-201ENSMUST00000158399 131 ntBASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Gm27389-201ENSMUST00000183622 195 ntBASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Gm44430-201ENSMUST00000203376 995 ntBASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43aQ3TL54 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm6257-201ENSMUST00000163864 910 ntBASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm10052-201ENSMUST00000168019 960 ntBASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm7729-201ENSMUST00000050143 801 ntBASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.59■□□□□ 0.25
Trim43aQ3TL54 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43aQ3TL54 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trim43aQ3TL54 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Trim43aQ3TL54 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43aQ3TL54 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43aQ3TL54 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43aQ3TL54 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Gm23634-201ENSMUST00000175071 91 ntBASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Mir6404-201ENSMUST00000183699 94 ntBASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43aQ3TL54 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim43aQ3TL54 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms