Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scn1bP97952 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scn1bP97952 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scn1bP97952 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn1bP97952 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Scn1bP97952 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn1bP97952 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Scn1bP97952 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn1bP97952 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.32□□□□□ -0.12
Scn1bP97952 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.32□□□□□ -0.12
Scn1bP97952 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn1bP97952 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn1bP97952 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn1bP97952 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn1bP97952 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scn1bP97952 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn1bP97952 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
Scn1bP97952 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scn1bP97952 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn1bP97952 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Scn1bP97952 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Scn1bP97952 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1bP97952 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.31□□□□□ -0.12
Scn1bP97952 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn1bP97952 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1bP97952 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms