Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC21.04■□□□□ 0.96
Nphp4P59240 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.04■□□□□ 0.96
Nphp4P59240 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 AC126250.1-201ENSMUST00000228343 1768 ntBASIC21.04■□□□□ 0.96
Nphp4P59240 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC21.04■□□□□ 0.96
Nphp4P59240 Gm13616-201ENSMUST00000120600 222 ntBASIC21.04■□□□□ 0.96
Nphp4P59240 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nphp4P59240 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nphp4P59240 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nphp4P59240 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.03■□□□□ 0.96
Nphp4P59240 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.03■□□□□ 0.96
Nphp4P59240 CT025626.1-201ENSMUST00000223735 1455 ntBASIC21.03■□□□□ 0.96
Nphp4P59240 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC21.03■□□□□ 0.96
Nphp4P59240 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nphp4P59240 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nphp4P59240 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nphp4P59240 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nphp4P59240 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nphp4P59240 Gm15920-201ENSMUST00000118998 402 ntBASIC21.03■□□□□ 0.96
Nphp4P59240 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC21.03■□□□□ 0.96
Nphp4P59240 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nphp4P59240 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC21.03■□□□□ 0.96
Nphp4P59240 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nphp4P59240 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nphp4P59240 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nphp4P59240 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC21.02■□□□□ 0.96
Nphp4P59240 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC21.02■□□□□ 0.96
Nphp4P59240 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC21.02■□□□□ 0.96
Nphp4P59240 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC21.02■□□□□ 0.96
Nphp4P59240 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nphp4P59240 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nphp4P59240 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nphp4P59240 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nphp4P59240 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nphp4P59240 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC21.01■□□□□ 0.95
Nphp4P59240 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nphp4P59240 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nphp4P59240 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nphp4P59240 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nphp4P59240 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC21■□□□□ 0.95
Nphp4P59240 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC21■□□□□ 0.95
Nphp4P59240 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Nphp4P59240 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nphp4P59240 Gm22065-201ENSMUST00000103753 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm22066-201ENSMUST00000103761 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24932-201ENSMUST00000103763 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24115-201ENSMUST00000103799 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm22190-201ENSMUST00000103827 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm22191-201ENSMUST00000103831 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24721-201ENSMUST00000103849 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm28018-201ENSMUST00000103869 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm26399-201ENSMUST00000103937 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC21■□□□□ 0.95
Nphp4P59240 Gm25349-201ENSMUST00000177728 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm23616-201ENSMUST00000177797 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm25871-201ENSMUST00000177816 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24752-201ENSMUST00000178240 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24496-201ENSMUST00000178287 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm25649-201ENSMUST00000178476 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm25548-201ENSMUST00000178681 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm23147-201ENSMUST00000178841 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm26095-201ENSMUST00000179270 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm22171-201ENSMUST00000179283 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm23936-201ENSMUST00000179354 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm22619-201ENSMUST00000179516 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm25255-201ENSMUST00000179579 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm24755-201ENSMUST00000179691 110 ntBASIC21■□□□□ 0.95
Nphp4P59240 Gm26506-201ENSMUST00000179692 110 ntBASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms