Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Prob1-201ENSMUST00000097619 3021 ntBASIC14.77□□□□□ -0.05
Nup43P59235 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Nup43P59235 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.77□□□□□ -0.05
Nup43P59235 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nup43P59235 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Nup43P59235 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup43P59235 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup43P59235 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.76□□□□□ -0.05
Nup43P59235 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Gm13418-201ENSMUST00000119097 944 ntBASIC14.76□□□□□ -0.05
Nup43P59235 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.76□□□□□ -0.05
Nup43P59235 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Nup43P59235 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nup43P59235 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.76□□□□□ -0.05
Nup43P59235 Gm19164-201ENSMUST00000210667 640 ntBASIC14.76□□□□□ -0.05
Nup43P59235 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.76□□□□□ -0.05
Nup43P59235 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 App-207ENSMUST00000227737 2827 ntBASIC14.76□□□□□ -0.05
Nup43P59235 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.76□□□□□ -0.05
Nup43P59235 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup43P59235 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nup43P59235 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.75□□□□□ -0.05
Nup43P59235 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Nup43P59235 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.75□□□□□ -0.05
Nup43P59235 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup43P59235 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nup43P59235 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.74□□□□□ -0.05
Nup43P59235 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nup43P59235 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.74□□□□□ -0.05
Nup43P59235 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.74□□□□□ -0.05
Nup43P59235 Gm11780-201ENSMUST00000136880 516 ntBASIC14.74□□□□□ -0.05
Nup43P59235 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.74□□□□□ -0.05
Nup43P59235 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.74□□□□□ -0.05
Nup43P59235 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Nup43P59235 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nup43P59235 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup43P59235 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.74□□□□□ -0.05
Nup43P59235 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms