Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tpm1P58771 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tpm1P58771 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tpm1P58771 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tpm1P58771 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.48■□□□□ 0.39
Tpm1P58771 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.48■□□□□ 0.39
Tpm1P58771 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.48■□□□□ 0.39
Tpm1P58771 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tpm1P58771 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.48■□□□□ 0.39
Tpm1P58771 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tpm1P58771 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tpm1P58771 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.47■□□□□ 0.39
Tpm1P58771 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.47■□□□□ 0.39
Tpm1P58771 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tpm1P58771 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.47■□□□□ 0.39
Tpm1P58771 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tpm1P58771 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tpm1P58771 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tpm1P58771 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm1P58771 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tpm1P58771 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tpm1P58771 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Tpm1P58771 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tpm1P58771 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Tpm1P58771 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.46■□□□□ 0.39
Tpm1P58771 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.46■□□□□ 0.39
Tpm1P58771 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Tpm1P58771 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm1P58771 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.46■□□□□ 0.39
Tpm1P58771 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tpm1P58771 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tpm1P58771 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Tpm1P58771 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Tpm1P58771 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Tpm1P58771 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Tpm1P58771 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tpm1P58771 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tpm1P58771 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm1P58771 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Tpm1P58771 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Tpm1P58771 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms