Protein–RNA interactions for Protein: P47242

Pax9, Paired box protein Pax-9, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax9P47242 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pax9P47242 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.32□□□□□ -0.28
Pax9P47242 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.32□□□□□ -0.28
Pax9P47242 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pax9P47242 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Gm13312-201ENSMUST00000119631 718 ntBASIC13.32□□□□□ -0.28
Pax9P47242 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.32□□□□□ -0.28
Pax9P47242 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pax9P47242 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.32□□□□□ -0.28
Pax9P47242 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pax9P47242 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pax9P47242 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.31□□□□□ -0.28
Pax9P47242 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.31□□□□□ -0.28
Pax9P47242 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.31□□□□□ -0.28
Pax9P47242 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.31□□□□□ -0.28
Pax9P47242 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.31□□□□□ -0.28
Pax9P47242 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.31□□□□□ -0.28
Pax9P47242 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.31□□□□□ -0.28
Pax9P47242 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pax9P47242 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pax9P47242 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.3□□□□□ -0.28
Pax9P47242 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Pax9P47242 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Pax9P47242 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pax9P47242 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.3□□□□□ -0.28
Pax9P47242 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pax9P47242 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pax9P47242 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Pax9P47242 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pax9P47242 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pax9P47242 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pax9P47242 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pax9P47242 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Pax9P47242 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms