Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Abca1P41233 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Gm8097-201ENSMUST00000117903 829 ntBASIC13□□□□□ -0.33
Abca1P41233 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13□□□□□ -0.33
Abca1P41233 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13□□□□□ -0.33
Abca1P41233 Gm7229-201ENSMUST00000214719 1007 ntBASIC13□□□□□ -0.33
Abca1P41233 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Abca1P41233 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Abca1P41233 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Abca1P41233 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Abca1P41233 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Abca1P41233 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.99□□□□□ -0.33
Abca1P41233 Mir8117-201ENSMUST00000184773 107 ntBASIC12.99□□□□□ -0.33
Abca1P41233 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.99□□□□□ -0.33
Abca1P41233 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Abca1P41233 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Abca1P41233 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Abca1P41233 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.99□□□□□ -0.33
Abca1P41233 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Abca1P41233 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Abca1P41233 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.99□□□□□ -0.33
Abca1P41233 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Abca1P41233 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.98□□□□□ -0.33
Abca1P41233 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Abca1P41233 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.98□□□□□ -0.33
Abca1P41233 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Abca1P41233 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.98□□□□□ -0.33
Abca1P41233 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.97□□□□□ -0.33
Abca1P41233 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Abca1P41233 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.97□□□□□ -0.33
Abca1P41233 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.97□□□□□ -0.33
Abca1P41233 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.97□□□□□ -0.33
Abca1P41233 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Abca1P41233 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Abca1P41233 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.97□□□□□ -0.33
Abca1P41233 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Abca1P41233 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Abca1P41233 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms