Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm45328-201ENSMUST00000210942 917 ntBASIC15.57■□□□□ 0.08
LdlrP35951 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.57■□□□□ 0.08
LdlrP35951 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.57■□□□□ 0.08
LdlrP35951 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LdlrP35951 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.57■□□□□ 0.08
LdlrP35951 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LdlrP35951 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LdlrP35951 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LdlrP35951 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.56■□□□□ 0.08
LdlrP35951 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LdlrP35951 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LdlrP35951 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.56■□□□□ 0.08
LdlrP35951 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
LdlrP35951 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
LdlrP35951 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
LdlrP35951 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LdlrP35951 Gm37722-201ENSMUST00000193757 208 ntBASIC15.56■□□□□ 0.08
LdlrP35951 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.56■□□□□ 0.08
LdlrP35951 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.56■□□□□ 0.08
LdlrP35951 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LdlrP35951 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.56■□□□□ 0.08
LdlrP35951 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.56■□□□□ 0.08
LdlrP35951 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LdlrP35951 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LdlrP35951 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Mir770-201ENSMUST00000103252 94 ntBASIC15.55■□□□□ 0.08
LdlrP35951 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.55■□□□□ 0.08
LdlrP35951 Gm6443-201ENSMUST00000203599 874 ntBASIC15.55■□□□□ 0.08
LdlrP35951 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.55■□□□□ 0.08
LdlrP35951 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.55■□□□□ 0.08
LdlrP35951 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Birc2-201ENSMUST00000054878 378 ntBASIC15.55■□□□□ 0.08
LdlrP35951 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LdlrP35951 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.55■□□□□ 0.08
LdlrP35951 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LdlrP35951 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LdlrP35951 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LdlrP35951 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LdlrP35951 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LdlrP35951 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LdlrP35951 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.54■□□□□ 0.08
LdlrP35951 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms