Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.41□□□□□ -0.1
Sftpa1P35242 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sftpa1P35242 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sftpa1P35242 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.41□□□□□ -0.1
Sftpa1P35242 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.41□□□□□ -0.1
Sftpa1P35242 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sftpa1P35242 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Rpph1-201ENSMUST00000175096 319 ntBASIC14.4□□□□□ -0.1
Sftpa1P35242 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sftpa1P35242 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.4□□□□□ -0.1
Sftpa1P35242 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Sftpa1P35242 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sftpa1P35242 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sftpa1P35242 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Gm12428-201ENSMUST00000119844 727 ntBASIC14.39□□□□□ -0.11
Sftpa1P35242 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Gm6257-201ENSMUST00000163864 910 ntBASIC14.39□□□□□ -0.11
Sftpa1P35242 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Gm27622-201ENSMUST00000183779 60 ntBASIC14.39□□□□□ -0.11
Sftpa1P35242 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sftpa1P35242 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sftpa1P35242 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.38□□□□□ -0.11
Sftpa1P35242 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Gm7774-201ENSMUST00000200064 533 ntBASIC14.38□□□□□ -0.11
Sftpa1P35242 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.38□□□□□ -0.11
Sftpa1P35242 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sftpa1P35242 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.38□□□□□ -0.11
Sftpa1P35242 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sftpa1P35242 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms