Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Gm10517-202ENSMUST00000192970 758 ntBASIC13.49□□□□□ -0.25
Slc6a1P31648 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.49□□□□□ -0.25
Slc6a1P31648 Gm37025-201ENSMUST00000195159 829 ntBASIC13.49□□□□□ -0.25
Slc6a1P31648 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Slc6a1P31648 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Gm9987-201ENSMUST00000069768 567 ntBASIC13.49□□□□□ -0.25
Slc6a1P31648 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Slc6a1P31648 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc6a1P31648 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.48□□□□□ -0.25
Slc6a1P31648 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Slc6a1P31648 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Slc6a1P31648 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Slc6a1P31648 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.47□□□□□ -0.25
Slc6a1P31648 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.47□□□□□ -0.25
Slc6a1P31648 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm13559-201ENSMUST00000120476 863 ntBASIC13.47□□□□□ -0.25
Slc6a1P31648 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.47□□□□□ -0.25
Slc6a1P31648 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.47□□□□□ -0.25
Slc6a1P31648 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.47□□□□□ -0.25
Slc6a1P31648 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.47□□□□□ -0.25
Slc6a1P31648 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Slc6a1P31648 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc6a1P31648 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Slc6a1P31648 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc6a1P31648 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms