Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.08□□□□□ -0.32
CfdP03953 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CfdP03953 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
CfdP03953 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CfdP03953 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CfdP03953 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.07□□□□□ -0.32
CfdP03953 Gm12134-201ENSMUST00000122109 520 ntBASIC13.07□□□□□ -0.32
CfdP03953 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.07□□□□□ -0.32
CfdP03953 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CfdP03953 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CfdP03953 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CfdP03953 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CfdP03953 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CfdP03953 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CfdP03953 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.06□□□□□ -0.32
CfdP03953 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.06□□□□□ -0.32
CfdP03953 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CfdP03953 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.06□□□□□ -0.32
CfdP03953 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.06□□□□□ -0.32
CfdP03953 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.06□□□□□ -0.32
CfdP03953 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.06□□□□□ -0.32
CfdP03953 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.06□□□□□ -0.32
CfdP03953 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.06□□□□□ -0.32
CfdP03953 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CfdP03953 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.06□□□□□ -0.32
CfdP03953 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.06□□□□□ -0.32
CfdP03953 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CfdP03953 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CfdP03953 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CfdP03953 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CfdP03953 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms