Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Col4a1P02463 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a1P02463 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.06■□□□□ 0.64
Col4a1P02463 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a1P02463 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a1P02463 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.06■□□□□ 0.64
Col4a1P02463 Gm25287-201ENSMUST00000103846 110 ntBASIC19.06■□□□□ 0.64
Col4a1P02463 Gm22918-201ENSMUST00000103855 110 ntBASIC19.06■□□□□ 0.64
Col4a1P02463 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col4a1P02463 Gm10253-201ENSMUST00000194270 940 ntBASIC19.06■□□□□ 0.64
Col4a1P02463 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a1P02463 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a1P02463 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a1P02463 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a1P02463 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.05■□□□□ 0.64
Col4a1P02463 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Gm15483-201ENSMUST00000120338 456 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.05■□□□□ 0.64
Col4a1P02463 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col4a1P02463 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col4a1P02463 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Col4a1P02463 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col4a1P02463 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Col4a1P02463 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a1P02463 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Col4a1P02463 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col4a1P02463 Gm27618-201ENSMUST00000183671 60 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Gm2272-201ENSMUST00000194903 582 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col4a1P02463 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.05■□□□□ 0.64
Col4a1P02463 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.04■□□□□ 0.64
Col4a1P02463 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col4a1P02463 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Col4a1P02463 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Col4a1P02463 Gm12428-201ENSMUST00000119844 727 ntBASIC19.04■□□□□ 0.64
Col4a1P02463 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a1P02463 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.04■□□□□ 0.64
Col4a1P02463 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col4a1P02463 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.04■□□□□ 0.64
Col4a1P02463 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col4a1P02463 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a1P02463 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Col4a1P02463 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Gm12151-201ENSMUST00000121374 290 ntBASIC19.02■□□□□ 0.64
Col4a1P02463 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.02■□□□□ 0.64
Col4a1P02463 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.02■□□□□ 0.64
Col4a1P02463 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.02■□□□□ 0.64
Col4a1P02463 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Col4a1P02463 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a1P02463 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Col4a1P02463 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a1P02463 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a1P02463 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a1P02463 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a1P02463 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Col4a1P02463 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.02■□□□□ 0.63
Col4a1P02463 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.02■□□□□ 0.63
Col4a1P02463 Gm15693-201ENSMUST00000120470 637 ntBASIC19.01■□□□□ 0.63
Col4a1P02463 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col4a1P02463 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a1P02463 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms