Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.66□□□□□ -0.06
IghmP01872 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
IghmP01872 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.66□□□□□ -0.06
IghmP01872 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.66□□□□□ -0.06
IghmP01872 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
IghmP01872 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
IghmP01872 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.65□□□□□ -0.06
IghmP01872 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
IghmP01872 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.65□□□□□ -0.06
IghmP01872 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
IghmP01872 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.65□□□□□ -0.06
IghmP01872 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.65□□□□□ -0.06
IghmP01872 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
IghmP01872 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
IghmP01872 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IghmP01872 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IghmP01872 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
IghmP01872 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.64□□□□□ -0.07
IghmP01872 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.64□□□□□ -0.07
IghmP01872 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
IghmP01872 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
IghmP01872 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.64□□□□□ -0.07
IghmP01872 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
IghmP01872 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
IghmP01872 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.63□□□□□ -0.07
IghmP01872 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.63□□□□□ -0.07
IghmP01872 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.63□□□□□ -0.07
IghmP01872 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
IghmP01872 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.63□□□□□ -0.07
IghmP01872 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
IghmP01872 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
IghmP01872 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms